BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB005F01LP1|AL425397
(1056 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig685 1447 0.0
>3x_Contig685
Length = 2775
Score = 1447 bits (725), Expect = 0.0
Identities = 751/765 (98%), Gaps = 1/765 (0%)
Strand = Plus / Minus
Query: 1 gatcatcacagctgaatattgamagcacgataaataggttataagaagacaagggcaggt 60
|||||||||||||||||||||| || || |||||||||||||||||||||||||||||||
Sbjct: 768 gatcatcacagctgaatattgaaag-acaataaataggttataagaagacaagggcaggt 710
Query: 61 cggcacggcgcacctatcagtgccattcttgagccgctaatgatgtatgcgcaaggtcat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 709 cggcacggcgcacctatcagtgccattcttgagccgctaatgatgtatgcgcaaggtcat 650
Query: 121 gaatgtattaaacatatgcgtatatatgatagtatacatacagtattttacagagctaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 649 gaatgtattaaacatatgcgtatatatgatagtatacatacagtattttacagagctaaa 590
Query: 181 ggataaatattgaagagatttagttcgctcttgataaaatgaaaatgatatttattctgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 ggataaatattgaagagatttagttcgctcttgataaaatgaaaatgatatttattctgt 530
Query: 241 taatgcmaaacaaggagatggttaggatgataaatagaaaacgaaacaccgaaamatctg 300
|||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 529 taatgcaaaacaaggagatggttaggatgataaatagaaaacgaaacaccgaaaaatctg 470
Query: 301 gttaamatttgaatagtatttgamctttgaccattttcttataagatcatgattttcttt 360
||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 469 gttaaaatttgaatagtatttgaactttgaccattttcttataagatcatgattttcttt 410
Query: 361 attccgaatcctcatcatcttcttcggcagttttcaaccmagtgatgaatggcttggcag 420
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 409 attccgaatcctcatcatcttcttcggcagttttcaaccaagtgatgaatggcttggcag 350
Query: 421 ctctacgaaccttcttagaaacatcctttggtacaaacttcttagagcatttggtaccga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 ctctacgaaccttcttagaaacatcctttggtacaaacttcttagagcatttggtaccga 290
Query: 481 agctgataatctcttcttcggaaatgatgtcgttgttgtataattggaccaagatctttg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 agctgataatctcttcttcggaaatgatgtcgttgttgtataattggaccaagatctttg 230
Query: 541 gtagtmatgggatccattcttggtgatcmagtccaaggaatctttcaataccacccaama 600
||||| |||||||| ||||||||||||| ||||||||||||||||||||||||||||| |
Sbjct: 229 gtagtaatgggatcaattcttggtgatcaagtccaaggaatctttcaataccacccaaaa 170
Query: 601 mgttcttttcgaagtcttcgtccttcaataatttttgccagaacgcagtatgttcagaga 660
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 169 agttcttttcgaagtcttcgtccttcaataatttttgcaagaacgcagtatgttcagaga 110
Query: 661 tatccgatacgatatcttcatcgaaaagaacttgggccagaactgcagcaacctttggat 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 109 tatccgatacgatatcttcatcgaaaagaacttgggccagaactgcagcaacctttggat 50
Query: 721 cttccagaagctcgagttctgcaatctttttgtataattcaatat 765
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 49 cttccagaagctcgagttctgcaatctttttgtataattcaatat 5
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9171
Number of Sequences: 1807
Number of extensions: 9171
Number of successful extensions: 70
Number of sequences better than 1.0e-20: 1
length of query: 1056
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1040
effective length of database: 10,329,639
effective search space: 10742824560
effective search space used: 10742824560
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.3 bits)